Thank you all so much for the suggestions!
It's good to get opinions from actual Basenji owners. I need to start taking her out first thing when I get out of bed b/c she peed immediately when I put her on the floor again this morning. I think I'm going get some of Nature's Miracle too and I'll try the Nylon Bones and Tennis Balls. The only problem with Kongs is she is a very picky eater - she doesn't like peanut butter or cheese or dog treats… its very odd. She will only eat the food the breeder gave her which is a Holistic Dog puppy food.
I like the idea of putting her in her crate while I'm with her to slowly get accustomed to it - I know it will just take time. I'll try putting her food dish in it and see if she'll eat out of it.
I'll post an image of her as soon as I can. She's a cute one!